Transcriptome analysis of T(H)2 CD4(+) T cells differentiated from wild-type and NLRP3KO mice

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TitreTranscriptome analysis of T(H)2 CD4(+) T cells differentiated from wild-type and NLRP3KO mice
Type de publicationJournal Article
Year of Publication2015
AuteursBruchard M, Boidot R, Ghiringhelli F, Vegran F
JournalGENOMICS DATA
Volume5
Pagination314-315
Date PublishedSEP
Type of ArticleArticle
ISSN2213-5960
Mots-clésNLRP3, Th2 differentiation, transcriptome
Résumé

The Nod-like receptor NLRP3 is involved in the formation of NLRP3. Up to now, the immunological functions of NLRP3 independently of inflammasome is unclear. In this dataset containing 6 samples (T(H)0, T(H)2 cells at day 3 and day 6 in wild type or Nlrp3 deficient cells), we show that NLRP3 expression in CD4(+) T cells supports a T helper 2 (T(H)2) transcriptional program in a cell-intrinsic manner (raw and normalized data are accessible on Gene Expression Omnibus database under the number GSE54561, http://www.dtd.nlm.nih.gov/geo/query/acc.cgi?acc=GSE54561). Indeed, NLRP3 positively-regulated T(H)2 program independently of inflammasome formation. These data indicated that T(H)2 specific genes such as cMaf or Il4 were not induced in Nlrp3 deficient cells. These results demonstrate the capacity of NLRP3 to act as a key transcription factor in T(H)2 differentiation. (C) 2015 The Authors. Published by Elsevier Inc. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).

DOI10.1016/j.gdata.2015.06.031