Explicit Solvation Matters: Performance of QM/MM Solvation Models in Nucleophilic Addition
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Titre | Explicit Solvation Matters: Performance of QM/MM Solvation Models in Nucleophilic Addition |
Type de publication | Journal Article |
Year of Publication | 2018 |
Auteurs | Boereboom JM, Fleurat-Lessard P, Bulo RE |
Journal | JOURNAL OF CHEMICAL THEORY AND COMPUTATION |
Volume | 14 |
Pagination | 1841-1852 |
Date Published | APR |
Type of Article | Article |
ISSN | 1549-9618 |
Résumé | Nucleophilic addition onto a carbonyl moiety is strongly affected by solvent, and correctly simulating this solvent effect is often beyond the capability of single-scale quantum mechanical (QM) models. This work explores multiscale approaches for the description of the reversible and highly solvent-sensitive nucleophilic Nl center dot center dot center dot C=O bond formation in an Me2N (CH2)(3)-CH=O molecule. In the first stage of this work, we rigorously compare and test four recent quantum mechanical/molecular mechanical (QM/MM) explicit solvation models, employing a QM description of water molecules in spherical regions around both the oxygen and the nitrogen atom of the solute. The accuracy of the models is benchmarked against a reference QM simulation, focusing on properties of the solvated Me2N-(CH2)(3)-CH=O molecule in its ring-closed form. In the second stage, we select one of the models (continuous adaptive QM/MM) and use it to obtain a reliable free energy profile for the Nl center dot center dot center dot C bond formation reaction. We find that the dual-sphere approach allows the model to accurately account for solvent reorganization along the entire reaction path. In contrast, a simple microsolvation model cannot adapt to the changing conditions and provides an incorrect description of the reaction process. |
DOI | 10.1021/acs.jctc.7b01206 |